Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
172
DNase-seq
53
ChIP-seq
4
ATAC-seq
2
Capture-C
2
Hi-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Assay category
53
DNA binding
Target of assay
25
histone
25
histone modification
19
transcription factor
13
narrow histone mark
12
broad histone mark
9
control
2
RNA binding protein
Date released
33
August, 2017
15
December, 2017
3
August, 2021
2
September, 2017
Available data
1382
bam
1178
bigWig
1115
bed narrowPeak
839
fastq
707
bigBed narrowPeak
280
tagAlign
99
bed broadPeak
73
bigBed broadPeak
53
bed bed3+
3
tar
Organism
53
Homo sapiens
Biosample type
28
tissue
19
in vitro differentiated cells
3
primary cell
3
stem cell
Organ
21
pancreas
11
connective tissue
6
liver
4
adipose tissue
3
embryo
3
epithelium
Project
53
AMP
Genome assembly (visualization)
53
GRCh38
53
hg19
Lab
53
AMP-T2D consortium
Audit category:
14
missing controlled_by
Audit category:
10
inconsistent control read length
organ_slims!
brain
BIOSAMPLE
ASSAY
53 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
tissue
islet of Langerhans
21
white adipose tissue
4
liver
3
in vitro differentiated cells
adipocyte
7
Posterior foregut
3
definitive endodermal cell
3
pancreatic endoderm
3
primitive gut cell
3
primary cell
hepatocyte
3
stem cell
hESC
3
Download