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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1490
ChIP-seq
1385
total RNA-seq
424
ATAC-seq
290
single cell RNA-seq
163
DNase-seq
86
RNA microarray
84
snATAC-seq
55
pCHi-C
28
WGBS
24
Hi-C
14
RRBS
14
small RNA-seq
5
GRO-seq
5
STARR-seq
4
MeRIP-seq
3
CRISPR genome editing followed by DNA sequencing
3
FAIRE-seq
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
14
DNA methylation
Date released
8
July, 2019
6
August, 2017
Available data
12
bed bedMethyl
12
bigBed bedMethyl
4
fastq
Organism
14
Homo sapiens
Biosample type
10
tissue
4
primary cell
Organ
epithelium
5
musculature of body
4
kidney
brain
2
heart
2
liver
2
pancreas
1
connective tissue
1
eye
1
pericardium
1
vasculature
Project
14
AMP
Genome assembly (visualization)
12
hg19
Lab
14
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
brain
epithelium
BIOSAMPLE
ASSAY
14 results
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RRBS
tissue
skeletal muscle tissue
4
heart left ventricle
1
islet of Langerhans
1
kidney
1
liver
1
+ See 2 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
skeletal muscle cell
1
skeletal muscle myoblast
1
See all biosamples
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