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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
91
ATAC-seq
88
total RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
single cell RNA-seq
Assay category
88
Transcription
Date released
545
February, 2021
145
May, 2020
131
May, 2021
120
July, 2018
89
August, 2017
88
February, 2023
74
August, 2021
40
July, 2019
29
October, 2019
26
May, 2022
26
September, 2018
20
November, 2019
16
September, 2020
15
February, 2018
13
February, 2020
11
March, 2020
6
April, 2018
5
December, 2019
5
January, 2019
4
November, 2020
2
October, 2018
1
May, 2023
Available data
76
fastq
4
tsv
4
txt
Organism
88
Homo sapiens
Biosample type
76
primary cell
8
tissue
4
in vitro differentiated cells
Organ
39
epithelium
37
pancreas
4
bone element
4
connective tissue
4
eye
4
skeleton
Project
76
HPAP
12
AMP
T1D
Lab
76
Klaus Kaestner, Upenn
12
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
brain
award.project!
T1D
BIOSAMPLE
ASSAY
88 results
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total RNA-seq
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
pigmented layer of retina
2
retina
2
acetabular part of hip bone
1
ilium
1
ischium
1
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in vitro differentiated cells
immature adipocyte
2
adipocyte
1
preadipocyte
1
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