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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
17
WGBS
Assay category
34
DNA methylation
Date released
21
July, 2019
7
November, 2018
6
August, 2017
Available data
3064
bam
2824
bigWig
1574
tsv
1529
bed narrowPeak
1252
fastq
903
bigBed narrowPeak
280
tagAlign
275
bed broadPeak
247
bigBed broadPeak
224
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
bedpe bed3+
23
hic
11
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
hdf5
2
ibed
1
bedpe
1
vcf
Organism
34
Homo sapiens
Biosample type
24
tissue
9
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
3
connective tissue
3
liver
2
adipose tissue
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
34
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
Lab
34
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
organ_slims!
brain
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
34 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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