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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
Hi-C
Assay category
1
3D chromatin structure
Date released
1
October, 2019
Available data
2506
bam
2303
bigWig
1307
tsv
1281
bed narrowPeak
886
fastq
787
bigBed narrowPeak
224
bed broadPeak
199
bed bed3+
196
bigBed broadPeak
169
tagAlign
161
txt
64
xls
25
bed bedMethyl
25
bigBed bedMethyl
19
bedpe bed3+
17
hic
10
bed bed3
7
bed bedgraph
6
csv
3
tar
2
ibed
1
bedpe
1
hdf5
1
vcf
Organism
1
Homo sapiens
Biosample type
1
cell line
primary cell
Organ
1
pancreas
Project
1
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
1
AMP-T2D consortium
Audit category:
1
inconsistent assembly
organ_slims!
brain
audit.WARNING.category!
inconsistent control read length
biosample_type!
primary cell
BIOSAMPLE
ASSAY
1 results
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Hi-C
cell line
Panc1
1
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