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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1
Hi-C
Assay category
1
3D chromatin structure
Date released
1
October, 2019
Available data
2916
bam
2745
bigWig
1506
tsv
1433
bed narrowPeak
1281
fastq
807
bigBed narrowPeak
263
tagAlign
251
bed broadPeak
223
bigBed broadPeak
218
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
20
hic
11
bed bed3
8
csv
7
bed bedgraph
3
cool
3
tar
2
ibed
1
bedpe
1
hdf5
1
vcf
Organism
1
Homo sapiens
Biosample type
1
cell line
Organ
brain
2
blood vessel
2
epithelium
vasculature
1
connective tissue
1
liver
1
pancreas
Project
1
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
1
AMP-T2D consortium
Audit category:
1
inconsistent assembly
organ_slims!
brain
vasculature
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
1 results
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Hi-C
cell line
Panc1
1
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