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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
Assay category
6
DNA binding
Target of assay
86
histone
86
histone modification
44
broad histone mark
42
narrow histone mark
28
control
7
transcription factor
6
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
2
December, 2017
2
June, 2019
1
May, 2019
1
November, 2019
Available data
6
bam
6
bed narrowPeak
6
bigWig
5
bigBed narrowPeak
2
fastq
Organism
6
Homo sapiens
Biosample type
3
primary cell
2
in vitro differentiated cells
1
cell line
Organ
52
liver
11
heart
10
blood
10
bodily fluid
10
connective tissue
9
pancreas
8
epithelium
5
adipose tissue
5
vasculature
4
blood vessel
brain
3
kidney
1
artery
1
eye
Project
6
AMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
6
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
brain
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
primary cell
epithelial cell of proximal tubule
1
kidney epithelial cell
1
retinal pigment epithelial cell
1
in vitro differentiated cells
hepatocyte
2
cell line
EndoC_BH1
1
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