Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
Assay category
30
DNA binding
Target of assay
30
histone
30
histone modification
18
transcription factor
15
broad histone mark
15
narrow histone mark
6
chromatin remodeller
3
RNA binding protein
1
recombinant protein
Date released
11
November, 2017
9
August, 2017
7
December, 2017
2
February, 2018
1
October, 2018
Available data
30
bam
30
bigWig
30
fastq
28
bed narrowPeak
15
bigBed narrowPeak
11
bed broadPeak
11
bigBed broadPeak
11
tagAlign
6
bed bed3+
Organism
30
Homo sapiens
Biosample type
11
cell line
7
in vitro differentiated cells
6
tissue
4
primary cell
2
stem cell
Organ
12
liver
9
pancreas
5
epithelium
2
embryo
Project
30
AMP
Genome assembly (visualization)
30
hg19
28
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
31
inconsistent control read length
3
inconsistent assembly
inconsistent control run_type
organ_slims!
brain
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
30 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
11
in vitro differentiated cells
definitive endodermal cell
3
Hepatic endoderm
1
Posterior foregut
1
pancreatic endoderm
1
primitive gut cell
1
tissue
pancreas
4
body of pancreas
1
liver
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
stem cell
hESC
2
Download