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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1592
ChIP-seq
1456
total RNA-seq
452
ATAC-seq
296
single cell RNA-seq
99
DNase-seq
85
RNA microarray
78
snATAC-seq
75
WGBS
53
pCHi-C
30
Hi-C
15
RRBS
13
small RNA-seq
10
MeRIP-seq
5
GRO-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
FAIRE-seq
3
STARR-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
13
Transcription
Date released
13
July, 2019
Available data
13
bam
13
bigWig
13
tsv
Organism
13
Homo sapiens
Biosample type
11
tissue
2
primary cell
Organ
brain
3
adipose tissue
3
connective tissue
3
liver
2
musculature of body
2
pancreas
1
heart
kidney
Project
13
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
13
AMP-T2D consortium
organ_slims!
brain
kidney
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
13 results
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small RNA-seq
tissue
body of pancreas
2
right lobe of liver
2
heart
1
liver
1
occipital lobe
1
+ See 4 more…
primary cell
mesenchymal stem cell of adipose
1
skeletal muscle satellite cell
1
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