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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ChIP-seq
Assay category
30
DNA binding
Target of assay
19
histone
19
histone modification
11
transcription factor
10
narrow histone mark
9
broad histone mark
3
chromatin remodeller
Date released
November, 2017
15
August, 2017
11
December, 2017
2
February, 2018
1
November, 2018
1
October, 2018
Available data
30
bam
30
bed narrowPeak
30
bigWig
30
fastq
10
bed bed3+
7
bigBed narrowPeak
Organism
30
Homo sapiens
Biosample type
17
in vitro differentiated cells
6
tissue
4
primary cell
2
stem cell
1
cell line
Organ
9
pancreas
6
connective tissue
5
epithelium
3
embryo
2
liver
Project
30
AMP
Genome assembly (visualization)
30
GRCh38
30
hg19
Lab
30
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
35
inconsistent control read length
inconsistent control run_type
4
inconsistent assembly
organ_slims!
brain
month_released!
November, 2017
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
4
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
+ See 1 more…
tissue
pancreas
4
body of pancreas
1
liver
1
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
stem cell
hESC
2
cell line
HepG2
1
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