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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
149
DNase-seq
28
ChIP-seq
1
snATAC-seq
Assay category
150
DNA accessibility
28
DNA binding
Target of assay
13
transcription factor
12
histone
12
histone modification
6
broad histone mark
6
narrow histone mark
3
control
2
RNA binding protein
Date released
138
June, 2019
26
August, 2017
7
November, 2018
4
October, 2019
2
September, 2017
1
May, 2022
Available data
1681
bam
1570
bigWig
1053
tsv
792
bed narrowPeak
445
bigBed narrowPeak
365
fastq
178
bed bed3+
177
bed broadPeak
157
txt
149
bigBed broadPeak
120
tagAlign
64
xls
24
bed bedMethyl
24
bigBed bedMethyl
11
hic
10
bedpe bed3+
6
csv
4
bed bed3
1
bedpe
Organism
178
Homo sapiens
Biosample type
178
tissue
29
primary cell
25
in vitro differentiated cells
3
cell line
3
stem cell
Organ
68
kidney
36
limb
33
musculature of body
brain
27
heart
27
pancreas
18
ureter
6
adipose tissue
6
connective tissue
6
liver
5
blood vessel
5
vasculature
4
artery
3
eye
2
nerve
1
spleen
Project
178
AMP
Genome assembly (visualization)
177
GRCh38
172
hg19
Lab
178
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
Audit category:
14
missing controlled_by
organ_slims!
brain
BIOSAMPLE
ASSAY
178 results
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Clear Filters
DNase-seq
ChIP-seq
snATAC-seq
tissue
islet of Langerhans
21
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
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