Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
894
total RNA-seq
698
ChIP-seq
256
ATAC-seq
180
single cell RNA-seq
151
DNase-seq
87
RNA microarray
28
snATAC-seq
27
WGBS
23
pCHi-C
16
Hi-C
12
small RNA-seq
10
RRBS
4
MeRIP-seq
3
FAIRE-seq
3
snDrop-seq
Assay category
180
Transcription
Date released
106
August, 2021
47
September, 2023
9
April, 2020
6
April, 2018
6
February, 2021
3
May, 2023
1
December, 2019
1
February, 2023
1
May, 2022
Available data
109
tsv
13
txt
6
bam
6
bigWig
6
csv
6
fastq
Organism
180
Homo sapiens
Biosample type
180
tissue
136
primary cell
2
in vitro differentiated cells
Organ
93
heart
64
kidney
9
lung
6
blood vessel
6
pancreas
6
vasculature
2
artery
1
liver
1
musculature of body
Project
124
AMP
47
KPMP
9
LungMap
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
113
AMP-T2D consortium
47
KPMP
11
Katalin Susztak, Upenn
9
Xin Sun, UCSD
Audit category:
5
audit script error
organ_slims!
brain
month_released!
July, 2018
BIOSAMPLE
ASSAY
180 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
tissue
kidney
64
heart left ventricle
18
left cardiac atrium
18
right cardiac atrium
18
heart right ventricle
17
+ See 14 more…
See all biosamples
Download