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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
172
DNase-seq
53
ChIP-seq
5
Hi-C
4
ATAC-seq
2
Capture-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Assay category
5
3D chromatin structure
Date released
3
October, 2022
1
July, 2019
1
October, 2019
Available data
23
hic
20
bedpe bed3+
3
cool
2
bed bed3+
2
bigWig
2
hdf5
1
bedpe
1
fastq
Organism
5
Homo sapiens
Biosample type
4
primary cell
1
cell line
Organ
5
epithelium
4
pancreas
brain
2
blood vessel
2
vasculature
1
connective tissue
1
liver
Project
3
HPAP
2
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
3
Klaus Kaestner, Upenn
2
AMP-T2D consortium
Audit category:
3
audit script error
Audit category:
1
inconsistent assembly
organ_slims!
brain
BIOSAMPLE
ASSAY
5 results
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Hi-C
primary cell
endothelial cell of hepatic sinusoid
1
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
Panc1
1
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