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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
RRBS
17
WGBS
2
Hi-C
Assay category
34
DNA methylation
2
3D chromatin structure
Date released
22
July, 2019
7
November, 2018
6
August, 2017
1
October, 2019
Available data
3149
bam
2907
bigWig
1574
bed narrowPeak
1574
tsv
1337
fastq
915
bigBed narrowPeak
280
tagAlign
275
bed broadPeak
247
bigBed broadPeak
238
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
34
bed bedMethyl
34
bigBed bedMethyl
23
bedpe bed3+
23
hic
11
bed bed3
8
csv
7
bed bedgraph
4
tar
3
cool
2
hdf5
2
ibed
1
bedpe
1
vcf
Organism
36
Homo sapiens
Biosample type
24
tissue
10
primary cell
2
cell line
Organ
8
epithelium
8
heart
7
pancreas
brain
4
connective tissue
4
kidney
4
liver
4
musculature of body
4
vasculature
3
blood vessel
2
adipose tissue
2
spleen
1
eye
1
limb
1
pericardium
Project
36
AMP
Genome assembly (visualization)
19
hg19
18
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
1
inconsistent assembly
organ_slims!
brain
BIOSAMPLE
ASSAY
36 results
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Clear Filters
RRBS
WGBS
Hi-C
tissue
heart left ventricle
1
2
pancreas
1
2
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 10 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
endothelial cell of hepatic sinusoid
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
Panc1
1
See all biosamples
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