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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
186
ChIP-seq
Assay category
186
DNA binding
Target of assay
98
histone
98
histone modification
58
broad histone mark
47
transcription factor
41
control
40
narrow histone mark
9
RNA binding protein
3
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
399
May, 2021
341
May, 2020
319
August, 2021
315
November, 2017
228
October, 2019
204
February, 2023
200
May, 2022
188
June, 2019
168
July, 2018
94
December, 2017
92
May, 2019
90
July, 2019
86
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
February, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
7
October, 2017
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
186
bam
144
bed narrowPeak
144
bigWig
122
bigBed narrowPeak
94
fastq
15
bed bed3+
Organism
186
Homo sapiens
Biosample type
135
tissue
43
in vitro differentiated cells
5
primary cell
3
stem cell
Organ
63
liver
50
blood vessel
50
vasculature
brain
24
epithelium
21
heart
13
embryo
7
limb
7
musculature of body
5
artery
5
kidney
2
pancreas
Project
186
AMP
Genome assembly (visualization)
149
hg19
148
GRCh38
Lab
186
AMP-T2D consortium
Audit category:
27
inconsistent control
7
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
organ_slims!
brain
month_released!
February, 2020
BIOSAMPLE
ASSAY
186 results
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Clear Filters
ChIP-seq
tissue
liver
38
ascending aorta
16
thoracic aorta
16
aorta
13
germinal matrix
12
+ See 6 more…
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
primary cell
kidney epithelial cell
5
stem cell
hESC
3
See all biosamples
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