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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
ChIP-seq
Assay category
16
DNA binding
Target of assay
30
histone
30
histone modification
16
narrow histone mark
15
control
14
broad histone mark
11
transcription factor
7
recombinant protein
4
RNA binding protein
3
nucleotide modification
Date released
8
June, 2019
4
November, 2019
2
December, 2017
1
March, 2020
1
May, 2019
May, 2021
Available data
16
bam
16
bed narrowPeak
16
bigWig
9
bigBed narrowPeak
2
fastq
Organism
16
Homo sapiens
Biosample type
9
primary cell
5
cell line
2
in vitro differentiated cells
Organ
9
epithelium
5
pancreas
4
connective tissue
3
musculature of body
brain
2
embryo
2
heart
2
kidney
Project
15
AMP
1
T1D
Genome assembly (visualization)
16
GRCh38
16
hg19
Lab
16
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
Audit category:
1
inconsistent control read length
organ_slims!
brain
month_released!
May, 2021
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
primary cell
skeletal muscle satellite cell
3
cardiac fibroblast
2
mesenchymal stem cell
2
epithelial cell of proximal tubule
1
kidney epithelial cell
1
cell line
EndoC_BH1
5
in vitro differentiated cells
Hepatic endoderm
2
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