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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
total RNA-seq
32
ChIP-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
37
Transcription
32
DNA binding
14
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
15
narrow histone mark
Date released
709
February, 2021
411
August, 2017
399
May, 2021
341
May, 2020
319
August, 2021
315
November, 2017
204
February, 2023
200
May, 2022
168
July, 2018
159
October, 2019
156
June, 2019
94
December, 2017
86
November, 2018
85
July, 2019
85
May, 2019
80
April, 2019
76
October, 2018
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
10
February, 2020
8
January, 2018
7
August, 2020
7
October, 2017
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
73
fastq
72
bam
72
bigWig
46
bed narrowPeak
36
tsv
14
bigBed narrowPeak
1
csv
Organism
83
Homo sapiens
Biosample type
73
primary cell
10
tissue
Organ
73
pancreas
61
epithelium
brain
3
blood vessel
3
heart
limb
3
vasculature
2
adipose tissue
2
artery
2
connective tissue
2
musculature of body
1
eye
1
liver
1
nerve
1
spinal cord
Project
83
AMP
Genome assembly (visualization)
72
GRCh38
72
hg19
Lab
83
AMP-T2D consortium
Audit category:
32
missing controlled_by
organ_slims!
brain
limb
BIOSAMPLE
ASSAY
83 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic ductal cell
4
13
4
pancreatic beta cell
10
4
pancreatic acinar cell
2
8
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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tissue
C1 segment of cervical spinal cord
1
ascending aorta
1
body of pancreas
1
coronary artery
1
left ventricle myocardium
1
+ See 5 more…
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