Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
407
ChIP-seq
Assay category
407
DNA binding
Target of assay
246
transcription factor
82
histone
82
histone modification
76
control
66
recombinant protein
51
broad histone mark
39
RNA binding protein
31
narrow histone mark
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
715
February, 2021
411
August, 2017
399
May, 2021
341
May, 2020
319
August, 2021
315
November, 2017
228
October, 2019
204
February, 2023
200
May, 2022
188
June, 2019
168
July, 2018
94
December, 2017
92
May, 2019
90
July, 2019
86
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
February, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
7
October, 2017
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
406
bam
340
bigWig
321
bed narrowPeak
321
bigBed narrowPeak
315
fastq
58
bed broadPeak
58
bigBed broadPeak
12
tagAlign
3
tar
Organism
407
Homo sapiens
Biosample type
315
cell line
87
tissue
5
primary cell
Organ
315
liver
brain
56
vasculature
53
blood vessel
21
heart
11
epithelium
7
limb
7
musculature of body
5
artery
5
kidney
2
pancreas
Project
407
AMP
Genome assembly (visualization)
338
hg19
288
GRCh38
Lab
407
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
brain
BIOSAMPLE
ASSAY
407 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
ascending aorta
16
thoracic aorta
16
aorta
13
germinal matrix
12
right atrium auricular region
10
+ See 4 more…
primary cell
kidney epithelial cell
5
See all biosamples
Download