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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
7
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
70
DNA binding
8
DNA accessibility
7
DNA methylation
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
322
August, 2017
315
November, 2017
217
May, 2021
199
October, 2019
188
June, 2019
151
May, 2020
144
February, 2021
140
May, 2022
139
August, 2021
106
February, 2023
94
December, 2017
92
May, 2019
85
November, 2018
80
April, 2019
74
October, 2018
47
March, 2020
46
September, 2018
41
November, 2019
40
May, 2024
36
July, 2019
35
December, 2018
25
January, 2019
24
February, 2018
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
7
October, 2017
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
85
bam
85
fastq
78
bigWig
71
bed narrowPeak
71
bigBed narrowPeak
7
bed bed3+
7
bed bedMethyl
7
bed broadPeak
7
bigBed bedMethyl
7
bigBed broadPeak
Organism
85
Homo sapiens
Biosample type
61
cell line
24
tissue
Organ
53
liver
15
blood
15
bodily fluid
9
spleen
7
pancreas
brain
1
adipose tissue
1
connective tissue
Project
85
AMP
Genome assembly (visualization)
77
GRCh38
69
hg19
Lab
85
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
brain
skeleton
assay_slims!
Transcription
BIOSAMPLE
ASSAY
85 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
omental fat pad
1
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