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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
single cell RNA-seq
54
total RNA-seq
1
small RNA-seq
Assay category
151
DNA accessibility
119
Transcription
37
DNA binding
1
3D chromatin structure
1
DNA methylation
Date released
57
August, 2021
47
September, 2023
5
February, 2021
4
October, 2019
3
May, 2023
2
July, 2019
1
December, 2019
Available data
62
txt
11
tsv
6
bam
6
bigWig
5
csv
Organism
119
Homo sapiens
Biosample type
115
tissue
primary cell
4
cell line
Organ
466
connective tissue
399
adipose tissue
324
pancreas
188
liver
162
heart
119
kidney
65
blood vessel
65
vasculature
62
bone element
56
artery
38
epithelium
brain
19
eye
14
embryo
9
lung
7
limb
7
musculature of body
5
nerve
4
skeleton
1
spinal cord
Project
72
AMP
47
KPMP
Genome assembly (visualization)
6
GRCh38
6
hg19
Lab
60
Katalin Susztak, Upenn
47
KPMP
12
AMP-T2D consortium
Audit category:
5
audit script error
3
inconsistent ontology term
organ_slims!
brain
biosample_type!
primary cell
BIOSAMPLE
ASSAY
119 results
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single cell RNA-seq
total RNA-seq
small RNA-seq
tissue
kidney
64
49
metanephros
1
1
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
glomerular visceral epithelial cell
1
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