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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
172
DNase-seq
53
ChIP-seq
4
ATAC-seq
2
Capture-C
2
Hi-C
2
pCHi-C
2
total RNA-seq
1
snATAC-seq
Assay category
172
DNA accessibility
Date released
157
June, 2019
7
November, 2018
7
October, 2019
1
November, 2020
Available data
177
bam
177
bed narrowPeak
177
bigBed narrowPeak
177
bigWig
174
bed broadPeak
174
bigBed broadPeak
172
bed bed3+
10
fastq
Organism
172
Homo sapiens
Biosample type
149
tissue
22
primary cell
1
cell line
Organ
78
kidney
36
limb
33
musculature of body
brain
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
8
connective tissue
7
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
172
AMP
Genome assembly (visualization)
172
GRCh38
159
hg19
Lab
172
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
brain
target.investigated_as!
other context
BIOSAMPLE
ASSAY
172 results
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Clear Filters
DNase-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
renal cortex interstitium
11
+ See 26 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
cardiac muscle cell
1
+ See 12 more…
cell line
Panc1
1
See all biosamples
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