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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
53
histone
53
histone modification
46
transcription factor
32
broad histone mark
21
narrow histone mark
6
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
22
August, 2017
8
November, 2017
2
October, 2019
Available data
347
bigWig
339
bed narrowPeak
317
bam
184
bigBed narrowPeak
112
fastq
102
tagAlign
32
bed broadPeak
16
bigBed broadPeak
12
bed bed3+
Organism
28
Homo sapiens
Biosample type
16
tissue
8
cell line
8
primary cell
Organ
8
liver
8
musculature of body
8
pancreas
brain
2
blood vessel
2
epithelium
2
vasculature
2
vein
Project
32
AMP
Genome assembly (visualization)
32
hg19
17
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
6
inconsistent control read length
2
inconsistent assembly
organ_slims!
brain
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
tissue
skeletal muscle tissue
8
islet of Langerhans
4
pancreas
4
cell line
HepG2
8
primary cell
skeletal muscle myoblast
6
endothelial cell of umbilical vein
2
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