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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
ChIP-seq
127
total RNA-seq
25
ATAC-seq
4
GRO-seq
4
Hi-C
4
pCHi-C
2
single cell RNA-seq
Assay category
127
Transcription
Date released
83
May, 2021
18
February, 2021
15
February, 2018
7
August, 2021
2
March, 2020
2
October, 2019
Available data
122
bam
122
bigWig
122
tsv
15
fastq
Organism
127
Homo sapiens
Biosample type
576
tissue
237
primary cell
127
in vitro differentiated cells
113
cell line
Organ
connective tissue
6
embryo
2
epithelium
1
heart
Project
127
AMP
Genome assembly (visualization)
122
GRCh38
122
hg19
Lab
122
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
87
inconsistent ontology term
organ_slims!
connective tissue
assay_slims!
DNA sequencing
BIOSAMPLE
ASSAY
127 results
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total RNA-seq
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
induced pluripotent stem cell
9
embryonic stem cell
7
neural progenitor cell
7
pancreatic endoderm
4
cardiomyocytes (cardiac muscle cell)
3
definitive endodermal cell
2
endocrine cell
2
posterior foregut
2
primitive gut cell
2
endothelial cell
1
hematopoietic multipotent progenitor cell
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
islet precursor cell
1
lymphocyte of B lineage (iPSC)
1
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
smooth muscle cell
1
stem cell
1
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