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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ChIP-seq
4
DNase-seq
4
pCHi-C
1
ATAC-seq
1
RRBS
Assay category
Transcription
5
DNA accessibility
5
DNA binding
1
DNA methylation
Target of assay
3
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
February, 2023
7
June, 2019
7
October, 2019
1
July, 2019
Available data
7
bam
6
bed narrowPeak
6
bigBed narrowPeak
6
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
15
Homo sapiens
Biosample type
10
tissue
5
primary cell
Organ
598
liver
453
pancreas
310
epithelium
261
brain
229
kidney
connective tissue
192
heart
134
vasculature
128
blood vessel
115
limb
93
bone element
89
adipose tissue
87
musculature of body
69
blood
69
bodily fluid
48
artery
38
nerve
25
spleen
23
embryo
22
vein
18
ureter
15
eye
11
lung
8
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
15
AMP
Genome assembly (visualization)
7
hg19
6
GRCh38
Lab
15
AMP-T2D consortium
organ_slims!
connective tissue
assay_slims!
Transcription
month_released!
February, 2023
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
DNase-seq
pCHi-C
ATAC-seq
RRBS
tissue
islet of Langerhans
2
4
1
retina
3
primary cell
retinal pigment epithelial cell
3
1
1
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