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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
8
DNase-seq
7
WGBS
1
FAIRE-seq
Assay category
70
DNA binding
9
DNA accessibility
7
DNA methylation
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
406
November, 2017
280
October, 2019
216
May, 2021
200
June, 2019
197
August, 2017
151
May, 2020
146
February, 2021
140
May, 2022
134
August, 2021
120
May, 2019
101
February, 2023
94
December, 2017
86
November, 2018
80
April, 2019
51
October, 2018
47
March, 2020
46
September, 2018
41
July, 2019
40
May, 2024
40
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
22
October, 2017
16
January, 2021
11
May, 2023
11
September, 2017
10
April, 2020
7
August, 2020
7
January, 2018
5
March, 2019
5
November, 2020
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2022
1
March, 2023
Available data
86
bam
86
fastq
79
bigWig
72
bed narrowPeak
72
bigBed narrowPeak
8
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
Organism
86
Homo sapiens
Biosample type
61
cell line
25
tissue
Organ
53
liver
15
blood
15
bodily fluid
9
spleen
7
pancreas
2
brain
1
adipose tissue
connective tissue
Project
86
AMP
Genome assembly (visualization)
78
GRCh38
70
hg19
Lab
86
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
connective tissue
assay_slims!
Transcription
target.investigated_as!
nucleotide modification
BIOSAMPLE
ASSAY
86 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
FAIRE-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
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