Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1666
ChIP-seq
993
total RNA-seq
431
ATAC-seq
301
single cell RNA-seq
122
DNase-seq
84
RNA microarray
78
snATAC-seq
69
WGBS
50
pCHi-C
32
Hi-C
16
RRBS
14
small RNA-seq
10
MeRIP-seq
5
GRO-seq
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
STARR-seq
2
Capture-C
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
14
Transcription
Date released
14
July, 2019
Available data
14
bam
14
bigWig
14
tsv
Organism
14
Homo sapiens
Biosample type
13
tissue
1
primary cell
Organ
4
brain
3
adipose tissue
connective tissue
3
liver
2
musculature of body
2
pancreas
1
heart
kidney
Project
14
AMP
Genome assembly (visualization)
14
GRCh38
14
hg19
Lab
14
AMP-T2D consortium
organ_slims!
connective tissue
kidney
assay_title!
HiChIP
BIOSAMPLE
ASSAY
14 results
search-icon
table-tab-icon
Clear Filters
small RNA-seq
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
+ See 6 more…
primary cell
skeletal muscle satellite cell
1
See all biosamples
Download