Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1678
ChIP-seq
1059
total RNA-seq
506
ATAC-seq
359
single cell RNA-seq
203
DNase-seq
86
RNA microarray
84
snATAC-seq
69
WGBS
52
pCHi-C
33
Hi-C
20
RRBS
15
small RNA-seq
10
MeRIP-seq
5
FAIRE-seq
5
GRO-seq
5
STARR-seq
3
CRISPR genome editing followed by DNA sequencing
3
snDrop-seq
2
Capture-C
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
1
DNA sequencing
Date released
84
February, 2021
2
December, 2019
1
August, 2021
Available data
84
txt
2
tsv
1
vcf
Organism
87
Homo sapiens
Biosample type
86
tissue
1
cell line
Organ
84
bone element
2
kidney
1
adipose tissue
connective tissue
1
epithelium
1
liver
Project
87
AMP
Lab
86
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
84
inconsistent ontology term
2
audit script error
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
87 results
search-icon
table-tab-icon
Clear Filters
RNA microarray
whole genome sequencing assay
tissue
bone element
84
kidney interstitium
1
renal glomerulus
1
cell line
HepG2
1
Download