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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
Assay category
3
DNA accessibility
Date released
3
February, 2023
Available data
405
bam
381
fastq
231
bigWig
196
tsv
181
bed narrowPeak
161
txt
153
zippedFastqFolder
130
tagAlign
41
bigBed narrowPeak
39
bed broadPeak
22
bedpe bed3+
22
hic
18
bed bedMethyl
18
bigBed bedMethyl
18
bigBed broadPeak
8
csv
7
bed bed3+
5
bed bed3
4
tar
3
bed bedgraph
3
cool
3
hdf5
2
ibed
1
bedpe
1
vcf
Organism
3
Homo sapiens
Biosample type
3
in vitro differentiated cells
Organ
connective tissue
Project
3
AMP
Genome assembly (visualization)
3
hg19
Lab
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
organ_slims!
connective tissue
assembly!
GRCh38
BIOSAMPLE
ASSAY
3 results
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ATAC-seq
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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