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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1151
ChIP-seq
815
total RNA-seq
229
ATAC-seq
198
DNase-seq
96
single cell RNA-seq
15
WGBS
15
small RNA-seq
2
Hi-C
Assay category
198
DNA accessibility
Date released
181
June, 2019
8
November, 2018
8
October, 2019
1
August, 2017
Available data
198
bam
198
bed narrowPeak
198
bigBed narrowPeak
198
bigWig
196
bed bed3+
196
bed broadPeak
196
bigBed broadPeak
9
fastq
Organism
198
Homo sapiens
Biosample type
175
tissue
21
primary cell
2
cell line
Organ
79
kidney
36
limb
33
musculature of body
32
brain
30
heart
18
ureter
17
epithelium
11
vasculature
9
blood vessel
connective tissue
8
pancreas
5
liver
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
198
AMP
Genome assembly (visualization)
198
GRCh38
178
hg19
Lab
198
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
198 results
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DNase-seq
tissue
heart
18
muscle of arm
17
brain
14
kidney
13
muscle of leg
13
+ See 39 more…
primary cell
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
astrocyte of the hippocampus
1
+ See 13 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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