Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
ChIP-seq
Assay category
89
DNA binding
Target of assay
684
histone modification
683
histone
446
transcription factor
359
narrow histone mark
324
broad histone mark
276
control
89
RNA binding protein
88
recombinant protein
22
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
29
November, 2017
20
November, 2018
6
January, 2019
6
October, 2018
5
May, 2021
5
May, 2024
4
April, 2019
4
December, 2017
4
May, 2019
2
August, 2017
2
December, 2018
1
August, 2021
1
November, 2019
Available data
81
bigWig
80
bed narrowPeak
78
bam
72
bigBed narrowPeak
69
fastq
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
tar
Organism
89
Homo sapiens
Biosample type
59
cell line
23
tissue
primary cell
7
in vitro differentiated cells
Organ
52
liver
10
blood
10
bodily fluid
10
heart
connective tissue
9
pancreas
5
adipose tissue
3
blood vessel
3
epithelium
3
vasculature
1
artery
1
kidney
Project
89
AMP
Genome assembly (visualization)
77
GRCh38
75
hg19
Lab
78
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
3
inconsistent control run_type
organ_slims!
connective tissue
biosample_type!
primary cell
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
89 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
48
GM12878
10
EndoC_BH1
1
tissue
body of pancreas
5
left cardiac atrium
5
heart left ventricle
3
islet of Langerhans
2
ascending aorta
1
+ See 7 more…
in vitro differentiated cells
embryonic stem cell
5
hepatocyte
2
See all biosamples
Download