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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
Assay category
3
3D chromatin structure
Date released
3
July, 2019
Available data
2796
bam
2595
bigWig
1739
bed narrowPeak
1254
fastq
1122
tsv
1011
bigBed narrowPeak
374
tagAlign
310
bed broadPeak
275
bigBed broadPeak
245
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
bigBed bedMethyl
23
hic
22
bedpe bed3+
8
csv
6
bed bed3
4
tar
3
bed bedgraph
3
cool
3
hdf5
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
3
Homo sapiens
Biosample type
3
primary cell
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
connective tissue
1
liver
Project
3
AMP
Genome assembly (visualization)
3
hg19
Lab
3
AMP-T2D consortium
Audit category:
inconsistent assembly
organ_slims!
connective tissue
files.file_type!
bigBed bedMethyl
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
3 results
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Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
endothelial cell of hepatic sinusoid
1
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