Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
148
ChIP-seq
89
total RNA-seq
6
RRBS
3
WGBS
1
DNase-seq
Assay category
148
DNA binding
89
Transcription
9
DNA methylation
1
DNA accessibility
Target of assay
101
histone modification
100
histone
51
broad histone mark
49
narrow histone mark
36
control
11
transcription factor
2
RNA binding protein
Date released
397
May, 2021
341
May, 2020
314
August, 2021
260
February, 2021
247
August, 2017
243
October, 2019
200
May, 2022
191
February, 2023
166
July, 2018
94
November, 2017
88
July, 2019
62
March, 2020
60
November, 2019
59
September, 2018
59
September, 2020
47
April, 2018
47
September, 2023
44
December, 2017
39
February, 2018
23
February, 2020
23
May, 2019
19
April, 2020
16
April, 2019
16
January, 2021
16
October, 2017
15
November, 2018
14
May, 2023
13
October, 2018
10
December, 2019
10
November, 2020
9
January, 2019
7
August, 2020
7
January, 2018
6
September, 2017
5
December, 2018
5
June, 2019
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
215
fastq
211
bam
207
bigWig
96
bed narrowPeak
89
tsv
63
tagAlign
39
bed broadPeak
bigBed narrowPeak
22
bed bed3+
14
bigBed broadPeak
4
bed bedMethyl
4
bigBed bedMethyl
Organism
246
Homo sapiens
Biosample type
207
tissue
40
primary cell
Organ
171
pancreas
connective tissue
55
adipose tissue
48
liver
26
epithelium
26
musculature of body
Project
247
AMP
Genome assembly (visualization)
173
hg19
149
GRCh38
Lab
247
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
4
inconsistent control read length
organ_slims!
connective tissue
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
247 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
RRBS
WGBS
DNase-seq
tissue
islet of Langerhans
42
89
liver
43
1
3
skeletal muscle tissue
22
4
pancreas
2
right lobe of liver
1
primary cell
pancreatic alpha cell
13
pancreatic beta cell
13
pancreatic endocrine cell
12
skeletal muscle myoblast
1
1
Download