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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
WGBS
16
RRBS
1
DNAme array
Assay category
959
Transcription
887
DNA binding
669
DNA accessibility
72
DNA methylation
29
3D chromatin structure
Date released
41
May, 2022
26
July, 2019
4
August, 2017
1
May, 2021
Available data
41
zippedFastqFolder
32
bed bedMethyl
32
bigBed bedMethyl
fastq
15
bam
14
bigWig
6
tsv
Organism
72
Homo sapiens
Biosample type
50
primary cell
22
tissue
Organ
47
epithelium
43
pancreas
10
heart
connective tissue
4
kidney
4
liver
4
musculature of body
3
adipose tissue
3
vasculature
2
blood vessel
2
brain
1
eye
1
limb
1
pericardium
Project
41
HPAP
31
AMP
Genome assembly (visualization)
14
hg19
8
GRCh38
Lab
41
Klaus Kaestner, Upenn
31
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
connective tissue
files.file_type!
fastq
biosample_type!
cell line
BIOSAMPLE
ASSAY
72 results
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WGBS
RRBS
DNAme array
primary cell
pancreatic alpha cell
25
pancreatic beta cell
16
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
+ See 6 more…
tissue
heart left ventricle
4
1
aorta
2
heart right ventricle
2
liver
2
skeletal muscle tissue
2
+ See 9 more…
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