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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
Hi-C
Assay category
4
3D chromatin structure
Date released
3
July, 2019
1
October, 2019
Available data
1390
bam
1308
bigWig
fastq
771
bed narrowPeak
503
tsv
463
bigBed narrowPeak
153
zippedFastqFolder
146
tagAlign
102
bed broadPeak
102
bigBed broadPeak
47
bed bed3+
12
bedpe bed3+
12
hic
10
bed bedMethyl
10
bigBed bedMethyl
4
hdf5
4
tar
4
txt
3
bed bedgraph
3
cool
2
csv
2
ibed
1
bed bed3
1
vcf
Organism
4
Homo sapiens
Biosample type
3
primary cell
1
cell line
Organ
3
brain
2
blood vessel
2
epithelium
2
vasculature
connective tissue
1
liver
1
pancreas
Project
4
AMP
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
4
AMP-T2D consortium
Audit category:
1
inconsistent assembly
organ_slims!
connective tissue
files.file_type!
fastq
biosample_type!
tissue
BIOSAMPLE
ASSAY
4 results
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Clear Filters
Hi-C
primary cell
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
endothelial cell of hepatic sinusoid
1
cell line
Panc1
1
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