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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
RRBS
8
WGBS
Assay category
22
DNA methylation
Date released
22
July, 2019
Available data
2679
bam
2502
bigWig
1645
bed narrowPeak
fastq
1122
tsv
917
bigBed narrowPeak
376
tagAlign
312
bed broadPeak
276
bigBed broadPeak
246
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
23
hic
22
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
22
Homo sapiens
Biosample type
14
tissue
8
primary cell
Organ
8
heart
6
epithelium
4
kidney
2
brain
2
musculature of body
2
pancreas
2
vasculature
1
blood vessel
connective tissue
1
eye
1
limb
1
liver
1
pericardium
Project
22
AMP
Genome assembly (visualization)
14
hg19
8
GRCh38
Lab
22
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
connective tissue
files.file_type!
fastq
month_released!
May, 2019
BIOSAMPLE
ASSAY
22 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
heart right ventricle
2
aorta
1
brain
1
heart
1
+ See 6 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 3 more…
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