Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
15
total RNA-seq
11
ATAC-seq
3
single cell RNA-seq
Assay category
24
DNA binding
18
Transcription
11
DNA accessibility
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
control
8
narrow histone mark
Date released
406
November, 2017
397
May, 2021
341
May, 2020
310
October, 2019
286
August, 2017
257
August, 2021
200
June, 2019
193
May, 2022
184
February, 2023
171
February, 2021
166
July, 2018
120
May, 2019
94
December, 2017
90
July, 2019
87
November, 2018
80
April, 2019
73
September, 2018
62
March, 2020
60
November, 2019
59
September, 2020
53
October, 2018
47
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
3
August, 2018
3
June, 2018
3
October, 2022
1
August, 2022
Available data
39
bam
39
fastq
31
bigWig
16
bed narrowPeak
15
tsv
Organism
53
Homo sapiens
Biosample type
39
in vitro differentiated cells
14
tissue
Organ
14
kidney
13
embryo
1
adipose tissue
connective tissue
Project
53
AMP
Genome assembly (visualization)
42
GRCh38
31
hg19
Lab
39
AMP-T2D consortium
14
Katalin Susztak, Upenn
Audit category:
2
inconsistent control read length
organ_slims!
connective tissue
files.file_type!
txt
BIOSAMPLE
ASSAY
53 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
single cell RNA-seq
in vitro differentiated cells
pancreatic endoderm
9
4
definitive endodermal cell
3
2
embryonic stem cell
3
2
endocrine cell
3
2
posterior foregut
3
2
+ See 2 more…
tissue
kidney
11
3
See all biosamples
Download