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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
12
WGBS
Assay category
30
DNA methylation
Date released
21
July, 2019
5
November, 2018
4
August, 2017
Available data
2661
bam
2492
bigWig
1636
bed narrowPeak
1233
fastq
1114
tsv
917
bigBed narrowPeak
376
tagAlign
275
bed broadPeak
239
bigBed broadPeak
209
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
23
hic
22
bedpe bed3+
8
csv
6
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
30
Homo sapiens
Biosample type
20
tissue
9
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
connective tissue
3
liver
2
adipose tissue
2
brain
spleen
2
vasculature
1
blood vessel
1
eye
limb
1
pericardium
Project
30
AMP
Genome assembly (visualization)
18
hg19
12
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
connective tissue
limb
spleen
BIOSAMPLE
ASSAY
30 results
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RRBS
WGBS
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
skeletal muscle tissue
2
+ See 8 more…
primary cell
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
kidney epithelial cell
1
+ See 4 more…
cell line
HepG2
1
See all biosamples
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