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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
RRBS
15
WGBS
2
single cell RNA-seq
Assay category
33
DNA methylation
2
Transcription
Date released
22
July, 2019
8
November, 2018
February, 2021
4
August, 2017
1
September, 2018
Available data
2678
bam
2498
bigWig
1720
bed narrowPeak
1212
fastq
1014
bigBed narrowPeak
1012
tsv
368
tagAlign
312
bed broadPeak
276
bigBed broadPeak
245
bed bed3+
153
zippedFastqFolder
72
txt
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
23
hic
22
bedpe bed3+
5
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
35
Homo sapiens
Biosample type
23
tissue
11
primary cell
1
cell line
Organ
8
heart
6
epithelium
6
pancreas
4
kidney
4
musculature of body
connective tissue
3
liver
2
adipose tissue
2
brain
2
spleen
2
vasculature
1
blood vessel
1
eye
1
limb
1
pericardium
Project
35
AMP
Genome assembly (visualization)
18
hg19
15
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
connective tissue
month_released!
February, 2021
BIOSAMPLE
ASSAY
35 results
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Clear Filters
RRBS
WGBS
single cell RNA-seq
tissue
heart left ventricle
1
2
pancreas
1
2
body of pancreas
2
heart right ventricle
2
skeletal muscle tissue
2
+ See 10 more…
primary cell
pancreatic cell
2
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 5 more…
cell line
HepG2
1
See all biosamples
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