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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
39
ATAC-seq
2
Hi-C
Assay category
41
DNA methylation
39
DNA accessibility
2
3D chromatin structure
Date released
80
May, 2022
2
July, 2019
Available data
317
bam
301
bigWig
257
fastq
156
tsv
151
bed narrowPeak
80
zippedFastqFolder
76
bigBed narrowPeak
22
bed broadPeak
22
bigBed broadPeak
21
bed bed3+
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
82
Homo sapiens
Biosample type
82
primary cell
Organ
82
epithelium
81
pancreas
3
brain
2
blood vessel
2
vasculature
connective tissue
1
liver
Project
80
HPAP
2
AMP
Genome assembly (visualization)
2
hg19
Lab
80
Klaus Kaestner, Upenn
2
AMP-T2D consortium
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
82 results
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WGBS
ATAC-seq
Hi-C
primary cell
pancreatic alpha cell
25
22
pancreatic beta cell
16
13
pancreatic acinar cell
4
brain microvascular endothelial cell
1
endothelial cell of hepatic sinusoid
1
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