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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
55
total RNA-seq
15
pCHi-C
1
DNAme array
Assay category
121
DNA binding
55
Transcription
DNA accessibility
1
DNA methylation
Target of assay
118
histone
118
histone modification
66
broad histone mark
52
narrow histone mark
3
control
Date released
192
May, 2021
76
February, 2023
74
May, 2022
59
September, 2018
56
September, 2020
54
August, 2017
47
May, 2020
46
July, 2018
41
April, 2018
27
October, 2019
23
July, 2019
19
June, 2019
18
February, 2021
9
November, 2017
5
December, 2019
5
May, 2019
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
171
bigWig
136
bam
114
bed narrowPeak
84
tagAlign
52
tsv
2
bed bed3+
Organism
192
Homo sapiens
Biosample type
192
primary cell
126
in vitro differentiated cells
40
tissue
5
cell line
Organ
1
bone element
1
bone marrow
connective tissue
Project
150
T1D
42
AMP
Genome assembly (visualization)
171
hg19
136
GRCh38
Lab
185
Kyle Gaulton, UCSD
7
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
connective tissue
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
192 results
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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
DNAme array
primary cell
monocyte
85
52
1
1
CD8-positive, alpha-beta T cell
33
2
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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