Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
ChIP-seq
53
total RNA-seq
15
pCHi-C
13
ATAC-seq
1
DNAme array
Assay category
121
DNA binding
53
Transcription
13
DNA accessibility
1
DNA methylation
Target of assay
118
histone
118
histone modification
66
broad histone mark
52
narrow histone mark
3
control
Date released
203
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
46
July, 2018
45
February, 2021
41
April, 2018
32
October, 2019
20
July, 2019
19
June, 2019
9
November, 2017
8
January, 2021
7
August, 2020
5
December, 2019
5
May, 2019
5
September, 2017
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
August, 2021
1
March, 2020
1
March, 2023
1
November, 2018
Available data
171
bigWig
149
bam
127
bed narrowPeak
84
tagAlign
52
tsv
bed bed3+
Organism
203
Homo sapiens
Biosample type
203
primary cell
131
in vitro differentiated cells
40
tissue
21
cell line
Organ
1
bone element
1
bone marrow
connective tissue
Project
150
T1D
53
AMP
Genome assembly (visualization)
182
hg19
149
GRCh38
Lab
183
Kyle Gaulton, UCSD
20
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
connective tissue
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
203 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
ATAC-seq
DNAme array
primary cell
monocyte
85
52
1
13
1
CD8-positive, alpha-beta T cell
33
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
+ See 10 more…
See all biosamples
Download