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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
Assay category
58
DNA binding
Target of assay
46
histone
46
histone modification
25
narrow histone mark
21
broad histone mark
12
transcription factor
6
chromatin remodeller
2
RNA binding protein
1
recombinant protein
Date released
32
September, 2018
12
August, 2017
10
November, 2017
3
November, 2018
1
December, 2017
Available data
58
bam
58
fastq
56
bigWig
44
bed narrowPeak
12
bigBed narrowPeak
Organism
58
Homo sapiens
Biosample type
44
primary cell
tissue
13
cell line
1
in vitro differentiated cells
Organ
44
pancreas
21
epithelium
13
liver
connective tissue
1
embryo
Project
58
AMP
Genome assembly (visualization)
56
hg19
49
GRCh38
Lab
58
AMP-T2D consortium
Audit category:
58
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
organ_slims!
connective tissue
lymph node
biosample_type!
tissue
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
cell line
HepG2
13
in vitro differentiated cells
pancreatic endoderm
1
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