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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
6
DNase-seq
3
WGBS
1
single cell RNA-seq
Assay category
70
DNA binding
6
DNA accessibility
3
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
406
November, 2017
341
May, 2020
336
May, 2021
310
August, 2021
292
October, 2019
228
February, 2021
153
June, 2019
135
February, 2023
111
May, 2019
94
December, 2017
94
May, 2022
80
April, 2019
80
November, 2018
74
July, 2019
72
August, 2017
47
September, 2023
43
March, 2020
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
20
February, 2020
19
April, 2020
17
October, 2017
14
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2021
6
January, 2018
5
March, 2023
5
November, 2019
2
June, 2018
1
October, 2022
1
September, 2018
Available data
80
fastq
79
bam
72
bigWig
69
bed narrowPeak
69
bigBed narrowPeak
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
1
csv
Organism
80
Homo sapiens
Biosample type
61
cell line
18
tissue
1
primary cell
Organ
53
liver
15
blood
15
bodily fluid
9
spleen
pancreas
2
brain
1
adipose tissue
connective tissue
Project
80
AMP
Genome assembly (visualization)
72
GRCh38
67
hg19
Lab
80
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
connective tissue
musculature of body
pancreas
BIOSAMPLE
ASSAY
80 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
single cell RNA-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
brain
2
right lobe of liver
1
primary cell
pancreatic cell
1
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