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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ATAC-seq
Assay category
67
DNA accessibility
Date released
64
August, 2021
3
February, 2023
Available data
2779
bam
2584
bigWig
1729
bed narrowPeak
1257
fastq
1122
tsv
1001
bigBed narrowPeak
376
tagAlign
308
bed broadPeak
272
bigBed broadPeak
244
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
21
hic
8
csv
6
bed bed3
4
hdf5
3
bed bedgraph
3
cool
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
67
Homo sapiens
Biosample type
64
tissue
3
in vitro differentiated cells
Organ
64
kidney
connective tissue
Project
67
AMP
Genome assembly (visualization)
64
GRCh38
3
hg19
Lab
64
Katalin Susztak, Upenn
3
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
organ_slims!
connective tissue
vein
BIOSAMPLE
ASSAY
67 results
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ATAC-seq
tissue
kidney
64
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
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