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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
20
total RNA-seq
3
ChIP-seq
2
Hi-C
Assay category
25
DNA accessibility
20
Transcription
3
DNA binding
2
3D chromatin structure
Target of assay
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
318
November, 2017
314
May, 2020
294
August, 2021
260
February, 2021
257
May, 2021
200
May, 2022
191
February, 2023
189
June, 2019
166
July, 2018
157
August, 2017
115
October, 2019
90
July, 2019
87
November, 2018
63
December, 2017
59
March, 2020
59
September, 2020
50
November, 2019
47
April, 2018
September, 2023
41
September, 2018
35
December, 2018
28
May, 2019
23
February, 2018
23
February, 2020
23
January, 2019
23
October, 2018
20
April, 2019
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
10
October, 2017
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
5
May, 2024
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
48
bam
26
bed narrowPeak
21
bigWig
20
tsv
2
bedpe bed3+
2
hic
Organism
50
Homo sapiens
Biosample type
39
tissue
6
cell line
5
in vitro differentiated cells
Organ
45
pancreas
6
epithelium
1
adipose tissue
connective tissue
Project
50
AMP
Genome assembly (visualization)
48
hg19
46
GRCh38
Lab
50
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
organ_slims!
connective tissue
target.investigated_as!
histone
month_released!
September, 2023
BIOSAMPLE
ASSAY
50 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
19
1
cell line
EndoC_BH1
1
1
3
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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