Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
23
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
100
DNA accessibility
23
DNA binding
Target of assay
27
histone
27
histone modification
narrow histone mark
23
control
Date released
368
November, 2017
333
May, 2021
314
May, 2020
303
August, 2021
260
February, 2021
226
August, 2017
200
May, 2022
193
June, 2019
191
February, 2023
170
October, 2019
166
July, 2018
90
July, 2019
87
November, 2018
86
May, 2019
78
December, 2017
59
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
56
November, 2019
47
April, 2018
47
September, 2023
42
October, 2018
35
December, 2018
31
February, 2018
27
January, 2019
23
February, 2020
20
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
September, 2017
10
December, 2019
10
November, 2020
7
August, 2020
7
January, 2018
5
March, 2019
5
March, 2023
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
Available data
256
bam
233
bigWig
189
tsv
23
tagAlign
Organism
314
Homo sapiens
Biosample type
166
tissue
147
primary cell
1
cell line
Organ
167
liver
Project
269
AMP
45
T1D
Genome assembly (visualization)
233
hg19
188
GRCh38
Lab
269
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
organ_slims!
connective tissue
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
314 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
23
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 24 more…
cell line
HepG2
1
See all biosamples
Download