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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
78
DNA binding
3
Transcription
Target of assay
39
transcription factor
23
histone
23
histone modification
16
control
13
broad histone mark
10
narrow histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
715
February, 2021
411
August, 2017
406
November, 2017
397
May, 2021
341
May, 2020
314
October, 2019
311
August, 2021
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
88
November, 2018
80
April, 2019
78
December, 2017
76
October, 2018
73
September, 2018
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
35
December, 2018
30
January, 2019
26
February, 2018
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
7
August, 2020
6
January, 2018
5
March, 2019
4
August, 2018
4
October, 2022
3
June, 2018
3
March, 2023
1
August, 2022
Available data
82
fastq
81
bam
65
bigWig
62
bed narrowPeak
50
bigBed narrowPeak
9
bed bed3+
3
tsv
1
bedpe bed3+
Organism
82
Homo sapiens
Biosample type
48
tissue
31
in vitro differentiated cells
3
primary cell
stem cell
Organ
63
liver
22
epithelium
embryo
3
pancreas
1
adipose tissue
1
connective tissue
Project
82
AMP
Genome assembly (visualization)
68
GRCh38
68
hg19
Lab
82
AMP-T2D consortium
Audit category:
27
inconsistent control
Audit category:
6
inconsistent control read length
organ_slims!
embryo
biosample_type!
stem cell
BIOSAMPLE
ASSAY
82 results
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Clear Filters
ChIP-seq
single cell RNA-seq
pCHi-C
tissue
liver
38
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
white fat cell
1
primary cell
pancreatic alpha cell
2
pancreatic acinar cell
1
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