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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
121
total RNA-seq
2
pCHi-C
2
single cell RNA-seq
Assay category
123
Transcription
Date released
77
May, 2021
22
February, 2021
11
February, 2018
7
August, 2021
4
March, 2020
2
December, 2019
2
October, 2019
Available data
263
bam
238
bigWig
125
tsv
118
bed narrowPeak
114
fastq
40
tagAlign
22
bed bed3+
17
bigBed narrowPeak
7
bed bedgraph
7
bedpe bed3+
5
bed bed3
4
hic
3
txt
2
ibed
1
bed broadPeak
1
bigBed broadPeak
Organism
125
Homo sapiens
Biosample type
1076
tissue
270
primary cell
125
in vitro differentiated cells
111
cell line
4
stem cell
Organ
embryo
5
connective tissue
2
epithelium
1
heart
Project
125
AMP
Genome assembly (visualization)
121
GRCh38
121
hg19
Lab
125
AMP-T2D consortium
Audit category:
88
inconsistent ontology term
2
audit script error
organ_slims!
embryo
BIOSAMPLE
ASSAY
125 results
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total RNA-seq
pCHi-C
single cell RNA-seq
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
induced pluripotent stem cell
9
neural progenitor cell
7
cardiomyocytes (cardiac muscle cell)
3
1
2
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