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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
Assay category
62
DNA binding
Target of assay
45
histone
45
histone modification
24
narrow histone mark
21
broad histone mark
17
transcription factor
6
chromatin remodeller
2
RNA binding protein
1
recombinant protein
Date released
32
September, 2018
17
August, 2017
10
November, 2017
3
November, 2018
Available data
62
bam
62
fastq
61
bigWig
44
bed narrowPeak
12
bigBed narrowPeak
Organism
62
Homo sapiens
Biosample type
44
primary cell
tissue
13
cell line
5
in vitro differentiated cells
Organ
44
pancreas
21
epithelium
13
liver
5
connective tissue
embryo
Project
62
AMP
Genome assembly (visualization)
61
hg19
54
GRCh38
Lab
62
AMP-T2D consortium
Audit category:
62
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
organ_slims!
embryo
files.file_type!
bedpe
biosample_type!
tissue
BIOSAMPLE
ASSAY
62 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
cell line
HepG2
13
in vitro differentiated cells
adipocyte
5
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