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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
WGBS
13
RRBS
3
Hi-C
Assay category
30
DNA methylation
3
3D chromatin structure
Date released
19
July, 2019
7
November, 2018
6
August, 2017
1
October, 2019
Available data
3043
bam
2841
bigWig
1654
bed narrowPeak
1430
tsv
1078
fastq
966
bigBed narrowPeak
391
tagAlign
300
bed broadPeak
263
bigBed broadPeak
249
bed bed3+
161
txt
73
zippedFastqFolder
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
18
bedpe bed3+
17
hic
12
bed bed3
8
csv
7
bed bedgraph
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
33
Homo sapiens
Biosample type
25
tissue
6
primary cell
2
cell line
Organ
epithelium
8
heart
7
pancreas
5
brain
4
connective tissue
4
kidney
4
liver
4
musculature of body
4
vasculature
3
blood vessel
2
adipose tissue
2
spleen
1
eye
1
limb
1
pericardium
Project
33
AMP
Genome assembly (visualization)
18
GRCh38
16
hg19
Lab
33
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
1
inconsistent assembly
organ_slims!
embryo
epithelium
BIOSAMPLE
ASSAY
33 results
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Clear Filters
WGBS
RRBS
Hi-C
tissue
heart left ventricle
2
1
pancreas
2
1
adipose tissue
2
body of pancreas
2
heart right ventricle
2
+ See 11 more…
primary cell
astrocyte of the cerebellum
1
brain pericyte
1
cardiac fibroblast
1
cardiac muscle cell
1
skeletal muscle cell
1
+ See 1 more…
cell line
HepG2
1
Panc1
1
See all biosamples
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